Protein Info for MPMX26_02890 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 360 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 35 to 53 (19 residues), see Phobius details amino acids 73 to 99 (27 residues), see Phobius details amino acids 127 to 145 (19 residues), see Phobius details amino acids 165 to 185 (21 residues), see Phobius details amino acids 192 to 214 (23 residues), see Phobius details amino acids 262 to 287 (26 residues), see Phobius details amino acids 307 to 326 (20 residues), see Phobius details amino acids 332 to 351 (20 residues), see Phobius details PF04332: DUF475" amino acids 53 to 355 (303 residues), 364.8 bits, see alignment E=5e-113 PF03741: TerC" amino acids 176 to 322 (147 residues), 32.1 bits, see alignment E=9.4e-12

Best Hits

KEGG orthology group: K09799, hypothetical protein (inferred from 85% identity to aci:ACIAD3451)

Predicted SEED Role

"Integral membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (360 amino acids)

>MPMX26_02890 hypothetical protein (Acinetobacter radioresistens SK82)
MKHFRFSIFFTVVCLALSAYWGYTHGPQAGIETMFKALTITAILAVMEVSLSFDNAVVNA
SVLRNWDHFWKMIFLTVGILIAVFGMRLIFPVVIVAVTADMGLMEVVRLALNDPTAYSQR
LMDHHAEIAAFGGAFLLLVFLNFFLDEGKDTHWFRWLERRLTSLASVPAMSVFIALIALL
VVAANVDETKRLVVTMAGIWGIVIYIGVQVLSHLLGGEPEIDEEGNAVTHDSTGAATGVV
KAGFGGFLYLEVLDASFSFDGVIGAFAITSDVVIIMLGLAIGAIFVRSMTIYLVEKGTLD
AYIYLEHGAHYAIGALAIIMLASGTGVHIPEVVTGLIGVAFIVWAVLASIQYRKRTERLG