Protein Info for MPMX26_02779 in Acinetobacter radioresistens SK82

Annotation: Lipase chaperone

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details PF03280: Lipase_chap" amino acids 131 to 320 (190 residues), 178.4 bits, see alignment E=8.1e-57

Best Hits

Swiss-Prot: 55% identical to LIFO_ACIAD: Lipase chaperone (lifO) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: None (inferred from 59% identity to abm:ABSDF0332)

Predicted SEED Role

"Lipase chaperone"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (342 amino acids)

>MPMX26_02779 Lipase chaperone (Acinetobacter radioresistens SK82)
MQKYKIWMVLSIVIICVAGLILWLMPQDKNIKQPVGPAAASGLLPQQTALTQAQVKAGIP
YLSPSQKDTEINCQLRLDSSNRLIINEQTRNCFEYFITQYGEKNIEQIKLDFKSYIQTVH
KDPAQSQILDLWNRYIDYRIALGDLQASSTDRDSTQYYRAIFNKMKNLRQQFFSAYEIEG
LFGTENIYHQYTLDRMDILDDKNLSESEKAQKLKELFKQLPQDWQDNLEQLNKLEDLRKL
TADIQARGGSNDEIRQMRLNLVGPEATQRLERLDTERDDWKSRVNQYLSARDHIKTGRMS
EAAKDQAIQQLRQQYFNNAQEQLRVETFETVHDQGGKLPFAN