Protein Info for MPMX26_02610 in Acinetobacter radioresistens SK82

Annotation: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 TIGR00515: acetyl-CoA carboxylase, carboxyl transferase, beta subunit" amino acids 42 to 297 (256 residues), 363.9 bits, see alignment E=2.9e-113 PF01039: Carboxyl_trans" amino acids 116 to 257 (142 residues), 57.5 bits, see alignment E=5.3e-20

Best Hits

Swiss-Prot: 89% identical to ACCD_ACIAD: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (accD) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K01963, acetyl-CoA carboxylase carboxyl transferase subunit beta [EC: 6.4.1.2] (inferred from 89% identity to aci:ACIAD0643)

MetaCyc: 58% identical to acetyl-CoA carboxyltransferase subunit beta (Escherichia coli K-12 substr. MG1655)
RXN0-5055 [EC: 2.1.3.15]

Predicted SEED Role

"Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)" in subsystem Fatty Acid Biosynthesis FASII (EC 6.4.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 6.4.1.2

Use Curated BLAST to search for 2.1.3.15 or 6.4.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (298 amino acids)

>MPMX26_02610 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (Acinetobacter radioresistens SK82)
MNQEVKPGKILSTPTPWTERSVPGIEVPDEQQALKATFTEPTIECPECHALVTRTAMSFN
AYVCPQCDEHLRMKARERLTWFLDQVTAELGQEFTAKDPLHFVDSRPYPERMREAQDKTG
ESEALIVMQGTLKNLPLVACAFEFDFMGGSMGTVVGDRFVQAAERAIAQRQPLICFAASG
GARMQEGMLSLMQMARTSAAIQRLKDAGLPYVVVLTHPVYGGVTASLAMLGDVHIAEPKA
MIGFAGKRVIEQTVREKLEEPFQRAEYLLDHGVVDQIVHRHALRDTVYRIVAKLMNLP