Protein Info for MPMX26_02556 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 transmembrane" amino acids 13 to 33 (21 residues), see Phobius details amino acids 40 to 59 (20 residues), see Phobius details amino acids 84 to 106 (23 residues), see Phobius details amino acids 118 to 143 (26 residues), see Phobius details amino acids 155 to 178 (24 residues), see Phobius details amino acids 198 to 217 (20 residues), see Phobius details amino acids 223 to 238 (16 residues), see Phobius details amino acids 241 to 259 (19 residues), see Phobius details amino acids 270 to 294 (25 residues), see Phobius details TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 305 to 472 (168 residues), 160 bits, see alignment E=2.1e-51 PF00990: GGDEF" amino acids 310 to 468 (159 residues), 142.7 bits, see alignment E=4.6e-46

Best Hits

Predicted SEED Role

"Putative Heme-regulated two-component response regulator" in subsystem Putative hemin transporter or cAMP signaling in bacteria

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (473 amino acids)

>MPMX26_02556 hypothetical protein (Acinetobacter radioresistens SK82)
MPYFQGRILKVQAWQYFFIFAIMIFACCMWGIATRPFNHLAAFWPANSILLGCLARFPAT
RNAYTLAGAFTGYVVSDLLSFHSWSIALGFTTANLLYVIIAFAFYIKFRPYFRLLHQGYF
YLFLLLFCCIGSLVSSLFIASLFPQLDTKLIHGSFWTIFGYWFSAELQNAILILPLILNL
PYQKGIHQIFRPADGPYSFLHILPIFVLLFSLSLSYYDSGPGAILYPIAALIWCALNYRH
FTVALITSISCFYIAFFMSDKYLTLYPEQYYLEMISLRFGIITMAIAPLTVSSINRIRSQ
LIRELQHHVAHDELTASLTRRQFMRSAHLLLRQRTQESQSLAVLMLDIDHFKLINDKYGH
QAGDEALRACAAVIRRSLRGYDLFGRLGGEEFAIVLLDVGPAEAFEIAERIRETLKTHII
QLDAETQFSIRISIGLTLFNPAVPHNIEALLHKADLALYEAKRSGRDRVVITQ