Protein Info for MPMX26_02424 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1043 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 58 to 81 (24 residues), see Phobius details amino acids 99 to 117 (19 residues), see Phobius details amino acids 144 to 167 (24 residues), see Phobius details PF13491: FtsK_4TM" amino acids 13 to 172 (160 residues), 105 bits, see alignment E=9.1e-34 PF17854: FtsK_alpha" amino acids 553 to 654 (102 residues), 107.4 bits, see alignment E=9.3e-35 PF01580: FtsK_SpoIIIE" amino acids 662 to 876 (215 residues), 245.4 bits, see alignment E=1.2e-76 PF09397: FtsK_gamma" amino acids 983 to 1043 (61 residues), 92 bits, see alignment 3.9e-30

Best Hits

Predicted SEED Role

"Cell division protein FtsK" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton or Bacterial RNA-metabolizing Zn-dependent hydrolases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1043 amino acids)

>MPMX26_02424 hypothetical protein (Acinetobacter radioresistens SK82)
MTAVSNVYAQRLLMTLFLVSFGIYLFLATVTYTPFDPGWMHISSDTQQVSNASGVAGAWI
ADLLFGFVGWASLLIPIYLFIEAIQLWWPRSFLNRPFRYAAQFFLILTTSSLLYLHWNLP
ADTLENASGGIIGYELGSSLVQVLTIYGATFFLIVFCLILLTLAFGIQWNKTWVTLKATP
AYLQDLFYRNVPSSESDFDRTEQQPIKKPVAIRTREPAQEQVLASEIKQPAKIASQPSAA
DLQAERLFNDMLAKEQIQHQMPSLDPEDEAEFERTLEKAHQLQQDSQRVVATGEVWRALQ
HDDNHDRDIDALLKAAEDDKPVTPHEHLQQVVVAQEERQPESRSPAYQPQTSHDDEILDW
NDDQIFDELLAAVPPTKTATDVHTPFNSKNISNGQGSSAASATVSSVTASVSGAASATGV
QSALMRQSMQNNGSDVAELEELVDFLVEDEDHFKDQPVRTTSSYAQSTPFVKAEIKTQFN
APERETEIEQHLDERKILAKDKEAFIEAWHETAGKPQEIEEEFDLDAPLTDRAGRPMSRA
MQVVHKRRDLSTLPPVDILDPVDPNKKVNFTAEQLARLSELLEIKLQEFNVKAKVVEAQP
GPVVTRFELDLAPGVKASKVTNISRDLARSMSMASVRVVEVIPGKPYIGIEVPNSSREMV
RLTELLETPAYRDPNGLISMAMGKDISGNPVLTDLAKAPHMLVAGTTGSGKSVAVNAMIL
SMLLKYTPDQLRLILIDPKQLELANYNDIPHLLTPVVTDMKDAVSALNWCVNEMERRYKL
MSFMKIRKITDYNRKVEEAIANGEDLIDPTWKPGDSATQERAPRLTPLPMIVIVADEFAD
MIMQVGKKAEEMITRLAQKSRAAGIHLLLATQRPSVDVITGLIKANIPTRVALRVNSKID
SRTILDAGGAEDLLGHGDMLFLGPGKIEPERVHGAFISDDEVNRICDAWRERGDPDYIDE
ILTPFDEEPSSRGFEDGGEGGSDRDMLYDQCVAFVLETRKASTSSLQRKFSLGYNRAARI
IDQMEENGIVSAMGANGKREILV