Protein Info for MPMX26_02388 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 48 to 67 (20 residues), see Phobius details amino acids 147 to 170 (24 residues), see Phobius details amino acids 176 to 198 (23 residues), see Phobius details amino acids 210 to 230 (21 residues), see Phobius details PF01988: VIT1" amino acids 18 to 225 (208 residues), 215 bits, see alignment E=5.5e-68

Best Hits

Swiss-Prot: 47% identical to PCL1_SCHPO: Fe(2+)/Mn(2+) transporter pcl1 (pcl1) from Schizosaccharomyces pombe (strain 972 / ATCC 24843)

KEGG orthology group: None (inferred from 66% identity to aci:ACIAD1173)

Predicted SEED Role

"putative nodulin 21-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (233 amino acids)

>MPMX26_02388 hypothetical protein (Acinetobacter radioresistens SK82)
MRHSYHAEQHYMERAGWLRAVVLGANDGIISVTSLVIGVAASGASTHTLLITCIAGLISG
AASMAAGEYISVKSQQDIEQSDLNMEARELDLHPAHELKELQDIYIRRGLDSDLARQVAQ
QLTAHNALDAHARDEIGISEQTSANPVLAAVASALAFSVGSLFPVAAIIFLPESILQSGI
IIIGILSLGVLGALASYAGGNSIWKGAIRIMIWGIIAMLFSAWVGSLFNVTAV