Protein Info for MPMX26_02383 in Acinetobacter radioresistens SK82

Annotation: Acetyl-CoA acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 PF00108: Thiolase_N" amino acids 4 to 261 (258 residues), 300.8 bits, see alignment E=8.1e-94 TIGR01930: acetyl-CoA C-acyltransferase" amino acids 6 to 389 (384 residues), 442.6 bits, see alignment E=6.1e-137 PF02803: Thiolase_C" amino acids 268 to 389 (122 residues), 148.8 bits, see alignment E=6e-48

Best Hits

Swiss-Prot: 48% identical to THLA_CLOAB: Acetyl-CoA acetyltransferase (thlA) from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)

KEGG orthology group: K00626, acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (inferred from 80% identity to abc:ACICU_03091)

MetaCyc: 57% identical to acetyl-CoA C-acetyltransferase (Methylibium petroleiphilum PM1)
Acetyl-CoA C-acyltransferase. [EC: 2.3.1.16, 2.3.1.9]

Predicted SEED Role

"3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)" (EC 2.3.1.16, EC 2.3.1.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.16, 2.3.1.9

Use Curated BLAST to search for 2.3.1.16 or 2.3.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>MPMX26_02383 Acetyl-CoA acetyltransferase (Acinetobacter radioresistens SK82)
MQPIVIVSGSRTAMGSFQGGLSSLTAPELGAAVIRESLQRADVQADQVDEVIMGCVLPAG
LKQGPARQAMRLAGLPDHVGATTINKICGSGMKAVMQAADAIKAGSADIVVAGGMESMSN
APYLMPKARAGFRMGHGEVKDHMFLEGLEDAETGRSMGSLAQDMANQKGYTREQMDEFAI
RSLTRAQKAISEGYLKDEIVPVTVSSRKGEVIVAQDENPFNAKIDKIATLRPAFAKDGTI
TAANASSISDGASAMLVMTEENAQQRGLTPLAKIVAYASHSQHPSEFTIAPVGAIEKVLK
KAGWNAAEVDLWEINEAFAMVTMAAIDAFELDVEKVNLHGGACALGHPLGSSGSRIILSL
IYALKRTGKRKGIAALCIGGGEATAIAIEIMA