Protein Info for MPMX26_02364 in Acinetobacter radioresistens SK82

Annotation: putative protein YaeQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 176 PF07152: YaeQ" amino acids 1 to 171 (171 residues), 221.2 bits, see alignment E=3.6e-70

Best Hits

Swiss-Prot: 43% identical to YAEQ_SHIFL: Uncharacterized protein YaeQ (yaeQ) from Shigella flexneri

KEGG orthology group: None (inferred from 77% identity to abb:ABBFA_002674)

Predicted SEED Role

"YaeQ protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (176 amino acids)

>MPMX26_02364 putative protein YaeQ (Acinetobacter radioresistens SK82)
MALKATIYKADLNIANMDTHQYSDHQLTLALHPSETIERLMVRIAAFARFADEQLEFTKD
LFETNEPALWQKDLTGQLEKWIEVGCPDEDKVKKASSRCKQVAIIAYGSQVSDWWKKNSK
IKTLDNVEVWQISEASTEALQALCERTMQLQLNVMDGEWTLIGNHAQAVIEWQQLK