Protein Info for MPMX26_02357 in Acinetobacter radioresistens SK82

Annotation: Proline/betaine transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 transmembrane" amino acids 15 to 36 (22 residues), see Phobius details amino acids 43 to 67 (25 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 113 to 139 (27 residues), see Phobius details amino acids 152 to 175 (24 residues), see Phobius details amino acids 187 to 207 (21 residues), see Phobius details amino acids 241 to 263 (23 residues), see Phobius details amino acids 279 to 300 (22 residues), see Phobius details amino acids 308 to 327 (20 residues), see Phobius details amino acids 335 to 355 (21 residues), see Phobius details amino acids 371 to 393 (23 residues), see Phobius details amino acids 399 to 417 (19 residues), see Phobius details PF00083: Sugar_tr" amino acids 19 to 228 (210 residues), 71.9 bits, see alignment E=5.1e-24 PF07690: MFS_1" amino acids 59 to 260 (202 residues), 77.5 bits, see alignment E=9.2e-26

Best Hits

KEGG orthology group: None (inferred from 80% identity to abc:ACICU_00921)

Predicted SEED Role

"L-Proline/Glycine betaine transporter ProP" in subsystem Proline, 4-hydroxyproline uptake and utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (422 amino acids)

>MPMX26_02357 Proline/betaine transporter (Acinetobacter radioresistens SK82)
MEAHSGLSAQDKRTLGLSSLGGALEFYDFVIYVFYAKIISELFFPIGLSPFWAMLNTYGI
FAAGYFFRPLGGVVMAHFGDLVGRKRLFSLSILLMALPTLVIGLMPTFESIGYAAPLLLL
LMRVVQGIAIGGEIPAAWTFVSEHVPEKKIGFANGLLTAGLSLGILLGALMSLFISLKFS
ETQIHDWAWRIPFIIGGVFGLVALYLRSYLKETPIFKAMQARKELSKELPIKQILARHKT
AVVIGMMFTWFLTGCVVVLILAMPNLLTGAFGIERSDAFTMQSAAIVMQMAGCILAGLLA
DRFGAGKVILIGSFCVAAIAGIFYTSLGHVSQSTIFILYMLLGLFSGTVGMVSYSMVRMF
PAQIRFSGISFSYNVAYAIAGGLTLPLVQWLSLYSKIGAMYYIWVVCLVAFFTAIIYRSK
FE