Protein Info for MPMX26_02038 in Acinetobacter radioresistens SK82

Annotation: tRNA (adenine(37)-N6)-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 transmembrane" amino acids 46 to 60 (15 residues), see Phobius details TIGR00104: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA" amino acids 5 to 153 (149 residues), 137.3 bits, see alignment E=2.1e-44 PF01980: TrmO_N" amino acids 22 to 147 (126 residues), 137.9 bits, see alignment E=1.9e-44 PF18389: TrmO_C" amino acids 165 to 232 (68 residues), 50.6 bits, see alignment E=1.6e-17

Best Hits

KEGG orthology group: None (inferred from 71% identity to abm:ABSDF1230)

Predicted SEED Role

"COG1720: Uncharacterized conserved protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (233 amino acids)

>MPMX26_02038 tRNA (adenine(37)-N6)-methyltransferase (Acinetobacter radioresistens SK82)
MKPSVSLPIIGYMKSPYQEKFGIPRQPNLVQIESYIDMLPPYNDLLAFAGIEAFSHLWLV
WQFHDNKSQDQTDKFRPQVRPPRLGGNKKLGVFATRSMYRPAPVGLSVVQLKEVKKVGKA
LRVYVTGSDLLDGTPVLDIKPYIHYSDAIPHAQSGYAQEEPLRKEVSWTEEALIKQQVLE
LSDQLIQELNDVLSFDPRPAYQEDPERIYKMKFACLDISFSVQAEQIIIIDLI