Protein Info for MPMX26_01993 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 137 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 41 to 58 (18 residues), see Phobius details amino acids 86 to 112 (27 residues), see Phobius details amino acids 118 to 136 (19 residues), see Phobius details PF20398: DUF6691" amino acids 1 to 131 (131 residues), 141 bits, see alignment E=1.7e-45

Best Hits

KEGG orthology group: K07112, (no description) (inferred from 71% identity to acd:AOLE_08465)

Predicted SEED Role

"GENE II AND X PROTEINS"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (137 amino acids)

>MPMX26_01993 hypothetical protein (Acinetobacter radioresistens SK82)
MKNILAFIFGSIFALGLSISGMANPEKVLDFLDITGTWDPSLAFVMIGAILVAIIPFQKA
LRSAEPKTVFHETIELPTNQKIDSKLIMGALIFGMGWGIAGICPAPGLTLIGLGHYESLY
FILAMLAGVFVHRKWFG