Protein Info for MPMX26_01773 in Acinetobacter radioresistens SK82

Annotation: Protein YceI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 199 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF04264: YceI" amino acids 27 to 190 (164 residues), 161.5 bits, see alignment E=9.8e-52

Best Hits

Swiss-Prot: 41% identical to Y1570_ENT38: UPF0312 protein Ent638_1570 (Ent638_1570) from Enterobacter sp. (strain 638)

KEGG orthology group: None (inferred from 77% identity to acd:AOLE_11035)

Predicted SEED Role

"conserved hypothetical protein; putative signal peptide"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (199 amino acids)

>MPMX26_01773 Protein YceI (Acinetobacter radioresistens SK82)
MKSLKVFGLGLAVAVTTTLSMAKPVDYKIDPTHTATVFSWDHFGFSTPYANFSDIQGTIK
VDNAKPANSSVDVTIPVSSLNTNVKALDEHLAKAEWFDAAKYPTITFKSTKVEPKKDKKH
FKITGNLTVKGITKPVVLDAVLNKQGEHPMTKAQSIGFNATTSFKRSDFGIASYVPNVGD
KITVQITTEASVAQATPKK