Protein Info for MPMX26_01719 in Acinetobacter radioresistens SK82

Annotation: Putative aminoacrylate peracid reductase RutC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 127 TIGR03610: pyrimidine utilization protein C" amino acids 1 to 127 (127 residues), 241 bits, see alignment E=1.3e-76 PF01042: Ribonuc_L-PSP" amino acids 14 to 125 (112 residues), 116.9 bits, see alignment E=2.8e-38

Best Hits

Swiss-Prot: 76% identical to RUTC_METRJ: Putative aminoacrylate peracid reductase RutC (rutC) from Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1)

KEGG orthology group: K09021, UPF0076 protein RutC (inferred from 76% identity to ebi:EbC_15640)

MetaCyc: 71% identical to 3-aminoacrylate deaminase (Escherichia coli K-12 substr. MG1655)
RXN0-6452

Predicted SEED Role

"Bona fide RidA/YjgF/TdcF/RutC subgroup"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (127 amino acids)

>MPMX26_01719 Putative aminoacrylate peracid reductase RutC (Acinetobacter radioresistens SK82)
MAKTVIIPEGTGTPLAPYVPATLADNIVYVSGTLPLDTNNEVVFVGDAAAQTRHVLSTIQ
NVIETAGGTMDDVTFNSIFLKDWADYAAINTVYREFFPNEKPARFCIQCGLVKPEALIEI
ASVAHIG