Protein Info for MPMX26_01719 in Acinetobacter radioresistens SK82
Annotation: Putative aminoacrylate peracid reductase RutC
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 76% identical to RUTC_METRJ: Putative aminoacrylate peracid reductase RutC (rutC) from Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1)
KEGG orthology group: K09021, UPF0076 protein RutC (inferred from 76% identity to ebi:EbC_15640)MetaCyc: 71% identical to 3-aminoacrylate deaminase (Escherichia coli K-12 substr. MG1655)
RXN0-6452
Predicted SEED Role
"Bona fide RidA/YjgF/TdcF/RutC subgroup"
MetaCyc Pathways
- uracil degradation III (5/5 steps found)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (127 amino acids)
>MPMX26_01719 Putative aminoacrylate peracid reductase RutC (Acinetobacter radioresistens SK82) MAKTVIIPEGTGTPLAPYVPATLADNIVYVSGTLPLDTNNEVVFVGDAAAQTRHVLSTIQ NVIETAGGTMDDVTFNSIFLKDWADYAAINTVYREFFPNEKPARFCIQCGLVKPEALIEI ASVAHIG