Protein Info for MPMX26_01692 in Acinetobacter radioresistens SK82

Annotation: Muconolactone Delta-isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 96 PF02426: MIase" amino acids 1 to 89 (89 residues), 138.8 bits, see alignment E=2.6e-45 TIGR03221: muconolactone delta-isomerase" amino acids 2 to 91 (90 residues), 160.7 bits, see alignment E=3.6e-52

Best Hits

Swiss-Prot: 84% identical to CATC_ACIAD: Muconolactone Delta-isomerase (catC) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K03464, muconolactone D-isomerase [EC: 5.3.3.4] (inferred from 92% identity to abn:AB57_2180)

MetaCyc: 56% identical to muconolactone isomerase monomer (Cupriavidus pinatubonensis JMP134)
5.5.1.-; 5.5.1.-; Muconolactone Delta-isomerase. [EC: 5.3.3.4]

Predicted SEED Role

"Muconolactone isomerase (EC 5.3.3.4)" in subsystem Catechol branch of beta-ketoadipate pathway (EC 5.3.3.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 5.3.3.4

Use Curated BLAST to search for 5.3.3.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (96 amino acids)

>MPMX26_01692 Muconolactone Delta-isomerase (Acinetobacter radioresistens SK82)
MLFHVRMDVHIPLDMPSEKANEIKAVEKAYSQELQRQGKWRHIWRITGQYSNISIFDVEN
NEELHNILQGLPLYPYMNIEIMALNRHPSSVRENDS