Protein Info for MPMX26_01649 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 104 PF01022: HTH_5" amino acids 12 to 56 (45 residues), 51.4 bits, see alignment E=4.1e-18

Best Hits

KEGG orthology group: K03892, ArsR family transcriptional regulator (inferred from 61% identity to abn:AB57_0254)

Predicted SEED Role

"Arsenical resistance operon repressor" in subsystem Arsenic resistance

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (104 amino acids)

>MPMX26_01649 hypothetical protein (Acinetobacter radioresistens SK82)
MEQTDFFKCLADSTRLNILKLVMNRENVCVCEFTAQLKLSQPKISRHLALLRNLGMLLDQ
RKGQWVYYRLNPDLPTWAHDILKIIALNPILNPLTSNIPDYCEE