Protein Info for MPMX26_01630 in Acinetobacter radioresistens SK82

Annotation: putative zinc protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 467 signal peptide" amino acids 1 to 39 (39 residues), see Phobius details PF00675: Peptidase_M16" amino acids 58 to 203 (146 residues), 81.9 bits, see alignment E=4.7e-27 PF05193: Peptidase_M16_C" amino acids 212 to 394 (183 residues), 115.5 bits, see alignment E=2.8e-37

Best Hits

KEGG orthology group: K01423, [EC: 3.4.-.-] (inferred from 73% identity to aci:ACIAD2298)

Predicted SEED Role

"FIG015547: peptidase, M16 family"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.4.-.-

Use Curated BLAST to search for 3.4.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (467 amino acids)

>MPMX26_01630 putative zinc protease (Acinetobacter radioresistens SK82)
MSQVTRQFKKHLKSISPFLFISLSIMAGTVVISTTLQAQTTTELSRTTVETSLSNGLKVI
IREDHRSPVVMTQIWYGVGSSDESGNLLGISHALEHMMFKGTTKVPHNEFTRLSRIYGGS
VNASTFTNYTNYYQLYPKSYLPLALELEADRMTNLVLKQEDFEPEIKVIMEERRLRTDDN
PRTLAFERFKWITYPTSHYRQPVIGYMKNLQNIQLNDLKNWYHSWYTPNNAILIIVGDVN
VEATLKQVEKYFGSIPARKTPERNDVIEFDRPGYRHMELSLPVQINNLYMAWNVRSLKTA
KNPQDAYALTIIQSLLDGSISSRLQNRLVRDKKILTAVSASYDPYNRGDTLFNITALPAD
GVSFQEAQEAIQKELDQLKTEAVNSNELERVITQFVSSLIYSQDDIAGQAKMIGNLEING
LSYRLLDKLPQHYETVTPQDIQRVANAYFVRENLSTLYLSPLPQDSK