Protein Info for MPMX26_01564 in Acinetobacter radioresistens SK82

Annotation: Molybdenum transport system permease protein ModB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 227 transmembrane" amino acids 15 to 36 (22 residues), see Phobius details amino acids 48 to 70 (23 residues), see Phobius details amino acids 90 to 112 (23 residues), see Phobius details amino acids 134 to 153 (20 residues), see Phobius details amino acids 196 to 218 (23 residues), see Phobius details TIGR02141: molybdate ABC transporter, permease protein" amino acids 12 to 217 (206 residues), 234.6 bits, see alignment E=4.6e-74 PF00528: BPD_transp_1" amino acids 28 to 222 (195 residues), 55.8 bits, see alignment E=2.5e-19

Best Hits

Swiss-Prot: 51% identical to MODB_HAEIN: Molybdenum transport system permease protein ModB (modB) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: K02018, molybdate transport system permease protein (inferred from 78% identity to aci:ACIAD1900)

MetaCyc: 52% identical to molybdate ABC transporter membrane subunit (Escherichia coli K-12 substr. MG1655)
ABC-19-RXN [EC: 7.3.2.5]

Predicted SEED Role

"Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (227 amino acids)

>MPMX26_01564 Molybdenum transport system permease protein ModB (Acinetobacter radioresistens SK82)
MFGPEELSALYLSAKVGLFATLVCLPFAIALAWYLARYEFRLKFMVEALLQLPMVLPPVV
LGYLLLILFGQQGLIGQYLHILGLELAFNWKGAVLASMVVAFPLMVQPIRLSFQLMNRQL
EHIAGTLGATPVQVFYSISLPLALPGMIIGSILCFSRSLGEFGATITFVGNIPGETRTVP
IAIYSFLQQPNGEEMALRLVMLSLVLAFSALIANYFILQKYQKKLEG