Protein Info for MPMX26_01556 in Acinetobacter radioresistens SK82

Annotation: 1,2-phenylacetyl-CoA epoxidase, subunit E

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 351 TIGR02160: phenylacetate-CoA oxygenase/reductase, PaaK subunit" amino acids 4 to 350 (347 residues), 426.7 bits, see alignment E=3e-132 PF00970: FAD_binding_6" amino acids 27 to 102 (76 residues), 37.7 bits, see alignment E=4.5e-13 PF08030: NAD_binding_6" amino acids 114 to 188 (75 residues), 25.5 bits, see alignment E=2.5e-09 PF00175: NAD_binding_1" amino acids 118 to 225 (108 residues), 62.9 bits, see alignment E=8.4e-21 PF00111: Fer2" amino acids 266 to 340 (75 residues), 68.6 bits, see alignment E=7.1e-23

Best Hits

KEGG orthology group: K02613, phenylacetic acid degradation NADH oxidoreductase (inferred from 72% identity to abc:ACICU_01340)

Predicted SEED Role

"Phenylacetate-CoA oxygenase/reductase, PaaK subunit"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (351 amino acids)

>MPMX26_01556 1,2-phenylacetyl-CoA epoxidase, subunit E (Acinetobacter radioresistens SK82)
MNQFIPLKIKSVSPQTEQAICIAFEIAPEQQQQFQYQPGQHLTIRHMSETGEIRRCYSIC
SDTQEDMSIAIKKIEQGQFSNWANNRLKAGDVLEVMPPQGVFFQKAAKTGGKNYLAFAAG
SGITPILSIVKSVLYQQENANLTLIYGNRSWKQTMFSEQIMDLKDRFKERFQLINIFSRE
MNDSQLLNGHIDTEKLQQLYSAGLINQDIDHCFACGPQAMMDAVEQTLPQFGIEHSKIHT
ERFNTGTTKVTTREIEGRNEEKVQIILDGRELVVEVSRQDDSILDAALRAGADLPYACKG
GVCATCKCKIIAGKVDMAVNYSLEEDEIAQGYVLSCQARPVTANVRLSFDE