Protein Info for MPMX26_01298 in Acinetobacter radioresistens SK82

Annotation: Phosphatidate cytidylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 29 to 46 (18 residues), see Phobius details amino acids 58 to 75 (18 residues), see Phobius details amino acids 81 to 98 (18 residues), see Phobius details amino acids 110 to 131 (22 residues), see Phobius details amino acids 137 to 156 (20 residues), see Phobius details amino acids 176 to 195 (20 residues), see Phobius details amino acids 201 to 223 (23 residues), see Phobius details amino acids 253 to 271 (19 residues), see Phobius details PF01148: CTP_transf_1" amino acids 3 to 265 (263 residues), 197.3 bits, see alignment E=4.6e-62 PF01864: CarS-like" amino acids 160 to 269 (110 residues), 24.1 bits, see alignment E=3.2e-09

Best Hits

KEGG orthology group: K00981, phosphatidate cytidylyltransferase [EC: 2.7.7.41] (inferred from 78% identity to acd:AOLE_07325)

Predicted SEED Role

"Phosphatidate cytidylyltransferase (EC 2.7.7.41)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.7.41)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.41

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (274 amino acids)

>MPMX26_01298 Phosphatidate cytidylyltransferase (Acinetobacter radioresistens SK82)
MLERIITALVLVAVVLSCMFATQSDYPMLGLMVLAAGVAGYEWFKLMPRTTKYVIKPIAW
SYGVLSAAISALVLYLNDIALLLWAASILTWIFSIYWVKSYPEYDNWYNATLKGIGIILI
CAAVTAIFAVWHSSPWWLMYLFLLVWGADSGAYFVGRKFGRKKLAPSVSPNKSVEGLYGG
VSVAAIIIVVVAWIYLDLTLIQYLLFIILSVATVLGSVLGDLFESMIKRRAGIKDSGRVL
PGHGGVLDRIDSLLAAAPIFAAGMYLLKLIGVDL