Protein Info for MPMX26_01171 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 TIGR03558: luciferase family oxidoreductase, group 1" amino acids 9 to 329 (321 residues), 432.4 bits, see alignment E=5.6e-134 PF00296: Bac_luciferase" amino acids 25 to 302 (278 residues), 147.9 bits, see alignment E=2.2e-47

Best Hits

Swiss-Prot: 52% identical to YHBW_ECOLI: Luciferase-like monooxygenase (yhbW) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 81% identity to aci:ACIAD2420)

Predicted SEED Role

"Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>MPMX26_01171 hypothetical protein (Acinetobacter radioresistens SK82)
MPNLVNTRFSILELVPVRDDKTVRFSLEHSLELAQHAEKLGYERLWLAEHHNMDGIASSA
TAVLLGYILANTEHLRVGSGGIMLPNHAPLVVAEQFGTLATLYPDRVELGLGRAPGTDQV
TMRALRRGRQETEDQFPQDVQEILHYFKEPQPGQRIVATPGQGTHVPVWLLGSSLFSAQL
AARLGLPYSFASHFAPRMLGQAIQLYRENFEPSEYLEKPYVSMGVPVVVAPTDEEANYLA
TSAYQRVLGLIRGQSLKLKPPVESMDGLWTPAEQLSVRNFYAMGQIGSPATVKAGLEQLL
HDYEVDEFIFTCDIYETQKRLETFSLLMDLKHSV