Protein Info for MPMX26_01092 in Acinetobacter radioresistens SK82

Annotation: Metalloprotease LoiP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF01435: Peptidase_M48" amino acids 73 to 246 (174 residues), 118.7 bits, see alignment E=1.4e-38

Best Hits

KEGG orthology group: None (inferred from 76% identity to aci:ACIAD1260)

Predicted SEED Role

"Zn-dependent protease with chaperone function"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (259 amino acids)

>MPMX26_01092 Metalloprotease LoiP (Acinetobacter radioresistens SK82)
MNNKILLSFFAAGAVTLSGCSTLADFAGADTATLNATAAQSYNQMVQEARAKNQLDTSSS
TYRRVNTVFNRLRPYADQMNQTGVKFDWQLTVLKSDQINAYVAPGGKVVVYTGIVNKLNL
TDAEIAAVMGHEMVHALEEHAKSKIGAQALTGLALNVGKAYAGDAIGSLGSAALDLGAQV
GVGLPYSRSLESRADQGGLILMARAGYNPQAAITLWEKMNKLEGAGGSSWLSTHPSNGER
IAAMRKNLPAAQAIYNQRK