Protein Info for MPMX26_01022 in Acinetobacter radioresistens SK82

Annotation: Thiamine-phosphate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 209 PF02581: TMP-TENI" amino acids 4 to 183 (180 residues), 181.3 bits, see alignment E=6e-58 TIGR00693: thiamine-phosphate diphosphorylase" amino acids 4 to 185 (182 residues), 160.9 bits, see alignment E=1.1e-51

Best Hits

Swiss-Prot: 45% identical to THIE_PSEFS: Thiamine-phosphate synthase (thiE) from Pseudomonas fluorescens (strain SBW25)

KEGG orthology group: K00788, thiamine-phosphate pyrophosphorylase [EC: 2.5.1.3] (inferred from 75% identity to acd:AOLE_04820)

Predicted SEED Role

"Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)" in subsystem Thiamin biosynthesis (EC 2.5.1.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (209 amino acids)

>MPMX26_01022 Thiamine-phosphate synthase (Acinetobacter radioresistens SK82)
MRGLYLITNDDPIELLLEKLEAALATHQIEILQYRRKKVEKADQLHEVERIKALCDFYKV
PLVINDDIRLAAQCGLGVHLGQTDGEIIEAKTQLPENMIIGRTCANSIELAEQAIADGAT
YIAFGAIYATYSKPEAGNIGLETLKLARQKFSLPICAIGGLKVENAQPVIQAGADLCAVI
SDILALPAEEIPSRVQAWAILFAETQPAI