Protein Info for MPMX26_00966 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 602 PF05947: T6SS_TssF" amino acids 1 to 597 (597 residues), 430.8 bits, see alignment E=4.7e-133 TIGR03359: type VI secretion protein, TIGR03359 family" amino acids 5 to 602 (598 residues), 525.9 bits, see alignment E=9.2e-162

Best Hits

KEGG orthology group: K11896, type VI secretion system protein ImpG (inferred from 77% identity to abc:ACICU_01300)

Predicted SEED Role

"Protein ImpG/VasA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (602 amino acids)

>MPMX26_00966 hypothetical protein (Acinetobacter radioresistens SK82)
MIEQLLPYYEKQLQEFSQQSREFAQKYPKIAQRLSLNQEQIDDPHIERLIQAFSLIAARI
DKKLEDSYDVFTRALFEVMFPQYLRHFPACTIVSFEDENKIRQLTGRHIIPKQTTLKSRS
FRGVQCEFNTSQQVILLPVALSQLEFKTSPTAHIHLSQNASLSLKFDIFNNAQAVLIQER
LPIYLDAISNFPLQVLDSIFRPETGFALRIGQQILKIDNPFSIIGFAEEECLLPVDQHTH
HAYRLLMEYFCFPEKFNYLNLDLGILKGRIQQYESFEVLIYFKLNLNDQSMIRNYSELNV
ANFKLFTSPAINLFEKQAEPQKITHTQLYYPLITDTHHPESYQVYSILEMNMVREKTNQE
QVYTSVLPFFAISHYKNEQVQFFYALDYQPIQTNFVEMRYSIISKHLKPFEIKSDFISIR
LLCSNRDLAHEALSQSNNILNLNDSSLARRALILKRPTVPYSFDQNKTEQWRIISHLSLN
TLALMKGDSLSHVKELLALYNLPSSKENHLIINAIDQLEFSLTHKLVDAKPFPMFIRGVK
AELSINSSVFKGHSLYIFSYLLSHIFNLKVQINSFVDVVITDSLSQQELYQCVQNVGGKT
LL