Protein Info for MPMX26_00752 in Acinetobacter radioresistens SK82

Annotation: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 407 PF00364: Biotin_lipoyl" amino acids 4 to 75 (72 residues), 60.8 bits, see alignment E=1.4e-20 TIGR01347: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex" amino acids 4 to 406 (403 residues), 592.5 bits, see alignment E=2.5e-182 PF02817: E3_binding" amino acids 123 to 153 (31 residues), 44 bits, see alignment (E = 3.1e-15) PF00198: 2-oxoacid_dh" amino acids 177 to 404 (228 residues), 282.4 bits, see alignment E=3.9e-88

Best Hits

KEGG orthology group: K00658, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC: 2.3.1.61] (inferred from 91% identity to aci:ACIAD2875)

Predicted SEED Role

"Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)" in subsystem TCA Cycle (EC 2.3.1.61)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.61

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (407 amino acids)

>MPMX26_00752 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (Acinetobacter radioresistens SK82)
MATEIKAPVFPESVADGTIATWHKKVGEAVSRDEVICDIETDKVVLEVVAPADGALVAIV
KDEGDTVLSDEVIAQFEAGAGATAEPAQTAVTSDGNVENASANTEAGPAPVVERSQPVQD
QAPAVRKALTETGINASDVSGTGRGGRITKEDVANHQSKPAAAAQPQALSVAVGERIEKR
VPMTRLRKRVAERLLAATQETAMLTTFNEVNMKPIMDMRNQYKDAFEKRHGARLGFMSFF
VKAATEALKRYPAVNASIDGDDIVYHGFYDIGVAVSSDRGLVVPVLRDTDRMNYAEVENG
IRAYAGKAREGKLAIEDMTGGTFTITNGGTFGSLLSTPILNTPQTAILGMHKIQERPMAV
NGQVEILPMMYLALSYDHRLIDGKEAVGFLVTIKELLEEPAKLILDL