Protein Info for MPMX26_00679 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 310 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 49 to 67 (19 residues), see Phobius details amino acids 73 to 92 (20 residues), see Phobius details amino acids 105 to 126 (22 residues), see Phobius details amino acids 132 to 153 (22 residues), see Phobius details amino acids 168 to 190 (23 residues), see Phobius details amino acids 197 to 219 (23 residues), see Phobius details amino acids 229 to 252 (24 residues), see Phobius details amino acids 258 to 277 (20 residues), see Phobius details amino acids 288 to 309 (22 residues), see Phobius details PF03547: Mem_trans" amino acids 12 to 305 (294 residues), 56.4 bits, see alignment E=2e-19 PF01758: SBF" amino acids 218 to 307 (90 residues), 27.2 bits, see alignment E=3e-10

Best Hits

KEGG orthology group: K07088, (no description) (inferred from 74% identity to aci:ACIAD2956)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (310 amino acids)

>MPMX26_00679 hypothetical protein (Acinetobacter radioresistens SK82)
MRPQHIVFHMTHIILALFPLVAFIATGYLFRRYHFLSIEFWSGAEKLNYYILFPALLFHT
LATAKIEFDSLKMLLAAMFITVLTATIVLYLLRYIKHIQPARFGVHTQSIVRFNTYIGLA
LVAALFKQEGMAILAVLLAVCIPLVNIISVLSLTSSEQMSLRPVIISLLKNPLIMSCLVG
AIVNVLKIPVWEGVFNLIKLFSAASLPLGLLCVGAALQFMEMKKDILTLMLDTFARLLVM
PALAIGICWWMQLPVLQTQILVIFFALPTASAAYILTKVLKGDSQLMAAVISLQTLCAAI
TLPLVIAWVM