Protein Info for MPMX26_00653 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 62 to 82 (21 residues), see Phobius details amino acids 94 to 112 (19 residues), see Phobius details amino acids 143 to 161 (19 residues), see Phobius details amino acids 170 to 188 (19 residues), see Phobius details amino acids 199 to 217 (19 residues), see Phobius details PF01569: PAP2" amino acids 97 to 217 (121 residues), 47 bits, see alignment E=1.1e-16

Best Hits

KEGG orthology group: None (inferred from 61% identity to aci:ACIAD2959)

Predicted SEED Role

"FIG00351128: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>MPMX26_00653 hypothetical protein (Acinetobacter radioresistens SK82)
MQNSNYFLSYQYILLFINFFILKIFFPVGGLIDLSLIQPWVSHSGEFLFRDSWYLAKLNH
SYIKDIIMAVYICYFMGWLSSFKCQKLKMYQMKWGYFFLVSLLCTSIVGLIKSQSAYACP
WNMTIPSISGFTWDFSAKNGHCFPGGHASTGFALLTGYFVYRLSNIKKACFFLVAGLILG
FAMGWAQMMRGAHFLSHNLWTLWICWCVNVLIYQIILKF