Protein Info for MPMX26_00624 in Acinetobacter radioresistens SK82

Annotation: putative chromate transport protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 6 to 32 (27 residues), see Phobius details amino acids 81 to 103 (23 residues), see Phobius details amino acids 111 to 132 (22 residues), see Phobius details amino acids 139 to 157 (19 residues), see Phobius details amino acids 163 to 184 (22 residues), see Phobius details amino acids 204 to 224 (21 residues), see Phobius details amino acids 236 to 255 (20 residues), see Phobius details amino acids 271 to 294 (24 residues), see Phobius details amino acids 302 to 326 (25 residues), see Phobius details amino acids 337 to 357 (21 residues), see Phobius details amino acids 368 to 398 (31 residues), see Phobius details PF02417: Chromate_transp" amino acids 9 to 174 (166 residues), 132.9 bits, see alignment E=5.8e-43 amino acids 230 to 388 (159 residues), 112.6 bits, see alignment E=1.1e-36 TIGR00937: chromate efflux transporter" amino acids 14 to 385 (372 residues), 271.6 bits, see alignment E=8.1e-85

Best Hits

Predicted SEED Role

"Chromate transport protein ChrA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (402 amino acids)

>MPMX26_00624 putative chromate transport protein (Acinetobacter radioresistens SK82)
MNLSVQYLTIFLIFLKLGCTSFGGPAAHLVFFHRTFVEKYRWLTSDEYTQLVALAQLLPG
PTSSQVGLGIGYLQRGYGGALLAWLGFTLPSIILMLGCALLSVSLSSWLSSSVFHIVQLI
VLAVVIFAFWQMLKNFCSTVWQFILMLASALIIYFIPLAMSQLLVIILGGVAGLYCVHTA
KLAVPIVVKDQPEIQKTVSTSFRAYYWLLIFVGLFILLFIMQWWAPSFAIQIFESFYRSG
SLVFGGGHIVLPLLYQELVTSRLIEESNFELGYAFAQLVPGPLFTFASYLGAFLPVTSSP
LINAAITTAAIFLPSFLLIFGTLPYWSILLRQTKIQAAVYGINAAVVGLLLAMVLQLGQK
GIQHWSDIIFVGLVIALLNSKIPVLLSLPLSCLGYFLFSLYF