Protein Info for MPMX26_00614 in Acinetobacter radioresistens SK82

Annotation: Sulfite reductase [ferredoxin]

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 547 PF03460: NIR_SIR_ferr" amino acids 53 to 109 (57 residues), 66.1 bits, see alignment 1.9e-22 amino acids 341 to 396 (56 residues), 46.4 bits, see alignment 2.7e-16 PF01077: NIR_SIR" amino acids 119 to 274 (156 residues), 149.6 bits, see alignment E=5.1e-48 amino acids 408 to 543 (136 residues), 48 bits, see alignment E=9.7e-17

Best Hits

KEGG orthology group: K00392, sulfite reductase (ferredoxin) [EC: 1.8.7.1] (inferred from 91% identity to aci:ACIAD2982)

Predicted SEED Role

"Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)" in subsystem Cysteine Biosynthesis (EC 1.8.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.8.1.2

Use Curated BLAST to search for 1.8.1.2 or 1.8.7.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (547 amino acids)

>MPMX26_00614 Sulfite reductase [ferredoxin] (Acinetobacter radioresistens SK82)
MYLYTDFDQQLVNERVAQFRDQTERYLAGKLTEDEYRPLRLQNGLYVQRYAPMLRMAVPY
GLMNSKQLRKIAEISKKYDRGYAHVSTRQNIQLNWPALEDVPDILAELATVQMHAIQTSG
NCIRNTTTDQYAGVVAGEIADPRPTCELIRQWSTFHPEFAFLPRKFKIAVSALAEVDRAA
TAFHDIGVYIIRNAQGELGYKIMVGGGLGRTPIIGSVIREFLPREDLIAYLEAVLRVYNL
HGRRDNKYKARIKILVKALTPQVFAEKVEAEFAHTRESLKIQPEVLKKLDEEFTPFDYQN
LADEDFAELFEAHPKFKHWFNINTHAHKVQGYRIVTISLKRAGVAPGDMTTEEMNLIADL
ADRYTFGELRTTHEQNIALVDVPQKDLFELWQTLDAQNLARAHIGFLTDIICCPGGDFCS
LANAKSIPIAEAITRRFEDLDTLYNLGQLDLNISGCMNACGHHHVGNIGILGVDKKGAEF
YQITLGGNADHDASIGDILGPSFAAEVVPDIIEEILNTYLDLRTDNEKFIDTYRRVGIQT
FKERAYA