Protein Info for MPMX26_00265 in Acinetobacter radioresistens SK82

Annotation: putative protein kinase UbiB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 539 transmembrane" amino acids 501 to 534 (34 residues), see Phobius details PF03109: ABC1" amino acids 94 to 339 (246 residues), 226.6 bits, see alignment E=1.3e-71

Best Hits

Swiss-Prot: 40% identical to UBIB_HAHCH: Probable protein kinase UbiB (ubiB) from Hahella chejuensis (strain KCTC 2396)

KEGG orthology group: K03688, ubiquinone biosynthesis protein (inferred from 88% identity to aci:ACIAD0382)

Predicted SEED Role

"Ubiquinone biosynthesis monooxygenase UbiB" in subsystem Ubiquinone Biosynthesis

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (539 amino acids)

>MPMX26_00265 putative protein kinase UbiB (Acinetobacter radioresistens SK82)
MIPHVTRLLELWRITAHYRLDTLVPAEEIPVKARPVLNLIRLHPAAWSSKERKNPLKLKE
ALEDMGPLAIKLGQLLSTRRDLIPPEILAQLVLLQDRVKPFPVEVAKSRIQQSLRADIYT
LFARFDEQPLAAASIAQVHTAALHDGREVVVKVTRPDIRVQILQDFEILAWLGHWLESRI
EAARALHLSEIIQDYRQIILNELDLTLEADNTRRMRHYFTGSSMMYVPEVYMDSPDVMVA
ERITGVPISDTATFDRMGMDRADLAEKGLTIFFTQVFRDNFFHADMHPGNVFVETINPQN
PRFIALDCAIMGELSKHDQMTVARMLLAVMNSNFMQLIQIVHQAGWIPPGTDQDALAREM
RRTVGPMVSKPMDQLDFAGILIQVMDIARRFHLEIPPQLMLLLKTLVHVEGLGTDLYPQL
DIWKLAKPILTDWIKANMHPVKNIKEIGQQIPDLLLGAQDLPSLLIDSLNGLKNQSSWHE
KQLRELQGMRLQIEHQQRRSWIFGSLIAIFLSIAIIAPWYLSVLLIAFASFLALWRVVK