Protein Info for MPMX26_00234 in Acinetobacter radioresistens SK82

Annotation: p-hydroxybenzoic acid efflux pump subunit AaeB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 694 transmembrane" amino acids 15 to 34 (20 residues), see Phobius details amino acids 40 to 57 (18 residues), see Phobius details amino acids 64 to 83 (20 residues), see Phobius details amino acids 89 to 108 (20 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details amino acids 151 to 171 (21 residues), see Phobius details amino acids 371 to 392 (22 residues), see Phobius details amino acids 398 to 415 (18 residues), see Phobius details amino acids 424 to 444 (21 residues), see Phobius details amino acids 449 to 469 (21 residues), see Phobius details amino acids 472 to 490 (19 residues), see Phobius details amino acids 501 to 523 (23 residues), see Phobius details PF04632: FUSC" amino acids 16 to 676 (661 residues), 500 bits, see alignment E=1.9e-153 PF13515: FUSC_2" amino acids 28 to 157 (130 residues), 47.8 bits, see alignment E=2.4e-16 PF11744: ALMT" amino acids 39 to 331 (293 residues), 25.9 bits, see alignment E=7.1e-10

Best Hits

KEGG orthology group: None (inferred from 68% identity to acd:AOLE_17850)

Predicted SEED Role

"FUSARIC ACID RESISTANCE PROTEIN FUSB / FUSARIC ACID RESISTANCE PROTEIN FUSC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (694 amino acids)

>MPMX26_00234 p-hydroxybenzoic acid efflux pump subunit AaeB (Acinetobacter radioresistens SK82)
MLFKQILAFRPGRMELTFALKTFIAGMLALFVSFRLDLINPMWSIGTVMIIASPFSGMVS
SKCVYRLIGTVAGAITALLLTPPLINTPWLFSVVLALWVGFALYISLLDRTPRSYVFMLA
GYSTAMIVCNAIGYIDSYNIFDLALARVLEISIGVIAHAVVSATVLPVHIGSVIRQRVTK
LLNDTENLFSNLLKNPHPDQNYSELLAGITRDSSDIHALAVHLSYEKGELQGMTKQLQEM
LHQMSMVIANLVAMSEKREQLYQLGFKKSEYLEKLQQHVLNFLNQKHPVAESQLTELPPE
FQADFNELLRDVNPEQYIVLSSIRMDIRHFIHNIRTVKLLWGLIQAGEKNIPESITPITT
TYPSLHRDYGVAVRGGISAFLITLIVCALWILSGWRMGFMMAQMGAVTACILTALDNPVP
VLRIFIWGSLVSAGLVFVYAFGIFPHITAFWELALVLLPMFLFSVSMMANPSLMPVGMVL
GINTMMGLNLRNSYSMDAVTYFDSSFAMILGVLVSLIVIYFVRAMSPETSATRILALHSK
AMRQALVLPYGTQFRIHLRSMLDRIGVLNTKMVQSSEIRSSINAALVECSAIVDLSRLQE
LAGQLSDHELLVKQIEQLGQQLEHYFELREQVDLWNAVPSTELVRQIKELRLLATNVKDN
ELRLRLLISLNNIQCSICHIGMSNTQLHFNMAGA