Protein Info for MPMX19_06846 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 222 TIGR01428: haloacid dehalogenase, type II" amino acids 7 to 200 (194 residues), 200.5 bits, see alignment E=4.3e-63 PF00702: Hydrolase" amino acids 7 to 187 (181 residues), 30.2 bits, see alignment E=5.8e-11 TIGR01493: HAD hydrolase, family IA, variant 2" amino acids 8 to 183 (176 residues), 49.3 bits, see alignment E=1e-16 PF13419: HAD_2" amino acids 93 to 189 (97 residues), 25.3 bits, see alignment E=1.5e-09

Best Hits

KEGG orthology group: K01560, 2-haloacid dehalogenase [EC: 3.8.1.2] (inferred from 97% identity to azl:AZL_c03240)

Predicted SEED Role

"Haloacid dehalogenase, type II"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.8.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (222 amino acids)

>MPMX19_06846 hypothetical protein (Azospirillum sp. SherDot2)
MSQFRPKYVTFDCHGTLINFQMAEAARDLYGSILDEARMTEFIRNFAAYRLDEIMGDWKP
YAEVVHNSLERSCKRNNVVFRDEDARMVYERVPTWGPHPDVPAGLAKVAKEIPLVILSNA
MNDQIPSNVAKLGAPFHAVYTAEQAQAYKPRFQAFEYMFDMLGCGPEDILHCSSSFRYDL
MSAHDLGIRNKVWVNRGHEPANPYYGYVEISDISGLPGVVGL