Protein Info for MPMX19_06839 in Azospirillum sp. SherDot2

Annotation: Glutathione import ATP-binding protein GsiA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 549 PF00005: ABC_tran" amino acids 25 to 184 (160 residues), 92.9 bits, see alignment E=9.9e-30 amino acids 302 to 453 (152 residues), 106.1 bits, see alignment E=8.6e-34 PF08352: oligo_HPY" amino acids 236 to 267 (32 residues), 20.8 bits, see alignment (E = 1.4e-07) amino acids 514 to 536 (23 residues), 19.2 bits, see alignment (E = 4.3e-07)

Best Hits

KEGG orthology group: K02031, peptide/nickel transport system ATP-binding protein K02032, peptide/nickel transport system ATP-binding protein (inferred from 92% identity to azl:AZL_c03310)

Predicted SEED Role

"Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)" in subsystem ABC transporter oligopeptide (TC 3.A.1.5.1) (TC 3.A.1.5.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (549 amino acids)

>MPMX19_06839 Glutathione import ATP-binding protein GsiA (Azospirillum sp. SherDot2)
MTNLVEIRGLTVEATTDSGRWIQILKGIDLDIAAGETVAFIGESGSGKTTAAMTLLGYAR
PGCRISGGTVRVDGHDMVTLSEKDRAALRGTTVAYVPQSAAAAFNPASTIMEQVIEVTRI
HRLMPPDEARRRAVALFRALSLPNPDSIGDRYPHQVSGGQLQRLAAAMALIGDPKVVIFD
EPTTALDVTTQVEVLRAFKAVTAQHRIACVYVSHDLAVVAQIADRIMVLRNGEVQETGSV
HDILTRPTHPYTQELLHAFHPDTGGREALPATDSGAPLLEINTLSAGYGPPQSNGQPLVL
AVKGVSLQVKRGTNLGIIGESGCGKSTLARAIAGILPACKGDIQFNGKELWHSARQRSHD
QLRDMQIVFQHADTALNPAKSIEDILGRPLTFYHGLRGKARDARVDALLDMVRLPRALRH
RRPAELSGGQKQRVNFARALAAEPKLILCDEITSALDTVVAAAVIDLLKELQRELGLSYV
FISHDLSVIEAICDEIVVMYRGQTVETIIPADRQQPQHPYSKLLFSSVPKLDPTWLDTLN
IDADRMRVA