Protein Info for MPMX19_06777 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 234 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 52 to 54 (3 residues), see Phobius details amino acids 61 to 81 (21 residues), see Phobius details amino acids 93 to 115 (23 residues), see Phobius details amino acids 121 to 139 (19 residues), see Phobius details amino acids 182 to 200 (19 residues), see Phobius details amino acids 205 to 227 (23 residues), see Phobius details PF06912: DUF1275" amino acids 15 to 217 (203 residues), 119.4 bits, see alignment E=9.3e-39

Best Hits

KEGG orthology group: None (inferred from 67% identity to sch:Sphch_3698)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (234 amino acids)

>MPMX19_06777 hypothetical protein (Azospirillum sp. SherDot2)
MSAPAASGTSPLPILLLLLSVTTGLVDAVSVLGLGKVFTANMTGNIVFLGFAVVGTPGFR
VLPAVAALLSFLSGALIAGRLGRTFAGRPMRHWLLTAALFETALFWIAAAVAAGFDVGTQ
APAAALYAIIVLTGFAMGFRNATVRQMKVPDLTTTVLTLTLTGLAADSGLAGGANTNARR
RMASVAAIFLGAALGAVMVMQSGLVLPLVVVGALVLAGTAFCALHPASTAPVAA