Protein Info for MPMX19_06732 in Azospirillum sp. SherDot2

Annotation: Toxin RTX-I translocation ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 740 transmembrane" amino acids 188 to 208 (21 residues), see Phobius details amino acids 220 to 239 (20 residues), see Phobius details amino acids 296 to 320 (25 residues), see Phobius details amino acids 326 to 346 (21 residues), see Phobius details amino acids 440 to 456 (17 residues), see Phobius details PF00664: ABC_membrane" amino acids 189 to 454 (266 residues), 141.4 bits, see alignment E=9.4e-45 PF00005: ABC_tran" amino acids 517 to 666 (150 residues), 121.6 bits, see alignment E=8.1e-39

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_f01850)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (740 amino acids)

>MPMX19_06732 Toxin RTX-I translocation ATP-binding protein (Azospirillum sp. SherDot2)
MPDASTTVTAPPPGPEAAPNHSESTALRCLTLVARHHGLSASPSALRARVATGGPDGEPS
TADLLRIAAATGFKATARRLDWAGLQSLPPVFPLLARLSNGNTVILVGLSRPANSAEEPA
EEPMVGVVDPLADRLDVIDVPRDRFLERWSGELVFLKPRHGLADPRQPFGLRWFVPEILR
QKSAFRDVVVAALVLHALALVVPVYFQIVIDKVLVNETVATLQVLTIGVLGALLFEAGFR
FLRQFILLAAANRIDIRLLNRTFGHLLDLPITFFDGHSAGVTVRHMQQVERIREFLTGNL
LSTVLDSLVLLVFLPVLFFYSVKLTLVALLFAGLIAGVVVALVPVYRSRLHDLYNADAER
QAMLVETIHGMRTVKSSALEPQQRRSWDRKAARAVTSHYRVGRISIAARTVTEFLEKAMM
VAVVAVGAFDVFDRQLSVGALIAFQMLSGRVVTPLVQIVSLIHQYQETALSVRMLGEVMN
HPAEPRREGSGACPALIGRIEIEGLGFRYDRNRPAALDGVTLTVPAGSVVGLVGRSGSGK
STLMRLLQGFYPVQEGSIRYDGLDIRELDLAHLRRSIGVVLQENFLFRGTIRDNIAMTMP
EASREEIVEAARLAGADEFIHRLPDGYDTLVEEGASNLSGGQKQRIAIARALLPQPRLLI
LDEATSALDPDSEAIVMANLRRIAHGRTVLIVTHRLSTLTGCDTIAVLEQGRLLDLAPHP
LLLDRCAEYRHLWQQQNRGR