Protein Info for MPMX19_06667 in Azospirillum sp. SherDot2

Annotation: Beta-barrel assembly-enhancing protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 737 PF13432: TPR_16" amino acids 37 to 96 (60 residues), 23.5 bits, see alignment 3.9e-08 amino acids 174 to 217 (44 residues), 15.7 bits, see alignment 1.1e-05 amino acids 242 to 290 (49 residues), 31.8 bits, see alignment 9.8e-11 amino acids 310 to 376 (67 residues), 31.8 bits, see alignment E=9.7e-11 amino acids 382 to 429 (48 residues), 23.2 bits, see alignment 4.9e-08 PF14559: TPR_19" amino acids 113 to 156 (44 residues), 25.2 bits, see alignment 1e-08 amino acids 149 to 205 (57 residues), 31.4 bits, see alignment 1.2e-10 amino acids 282 to 342 (61 residues), 31.9 bits, see alignment 8.3e-11 amino acids 358 to 414 (57 residues), 25.2 bits, see alignment 9.9e-09 PF13181: TPR_8" amino acids 173 to 201 (29 residues), 18.5 bits, see alignment (E = 1.1e-06) amino acids 242 to 270 (29 residues), 12.2 bits, see alignment (E = 0.00011) amino acids 309 to 338 (30 residues), 14.3 bits, see alignment (E = 2.2e-05) PF13374: TPR_10" amino acids 174 to 198 (25 residues), 15.4 bits, see alignment (E = 9.1e-06) amino acids 378 to 407 (30 residues), 19.8 bits, see alignment (E = 3.8e-07) PF13176: TPR_7" amino acids 174 to 199 (26 residues), 15.9 bits, see alignment (E = 7e-06) PF13414: TPR_11" amino acids 317 to 349 (33 residues), 29.1 bits, see alignment (E = 3.9e-10) PF01075: Glyco_transf_9" amino acids 647 to 678 (32 residues), 24.8 bits, see alignment (E = 7.7e-09)

Best Hits

Predicted SEED Role

"FOG: TPR repeat"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (737 amino acids)

>MPMX19_06667 Beta-barrel assembly-enhancing protease (Azospirillum sp. SherDot2)
MDRISKTRGAGHTQGERAGAERAEAGQAGTPPAGSLLTRAIAAHRAGRLTGAAGIYHALL
ALEPAHGDAWHLLGLTELQSQREAGALALFDRALRIACNRAEYHNSTGEGLRTQGDMAAA
AAAYRRAVALRPGYAEPVINLTRALQLLGQPDRARASGRRAIALAPERTEGAINLAHALL
DLGRFSEAQAFYHRVLSLQPDQAEAIGHLSRVARGSGDPRRMETALRRAMRVEPLVIDHP
QALGDLFIQRQELAAAEQVYRRVIALKPDHPEALNGLGSSCLMQKRYAAAKPHYHRAMLL
RPDYPSPHNNMANALWELGEAAAARTRYRQAIALKPDHPDAYGNLGHALRTRAKRFADYA
EAEKECRRALRLDPGNLAAGNNLGIVHLSRNELAAAEQCFRQVLARSAENADAHFNLSLT
LLKSGALAEGWRHYEWRWRTGQLPLPKLSQPRWQGEPLDGRSILVYAEQGHGDTLHFARY
VPLLAERTGTGRAGRVMLVAQPGLVRLLERMPGIASVHAVNDPVPDFDVHTPLLSLPGFF
GTTLDSIPAQIPYLAPDPADMELWRRRLPVHGGVRVGLVWAGDPRPHMLHANATDQRRSM
ALSQLAPLAAVPGAIFFSLQKGAAGLQARTPPRGMAVVDLMDEVNDFADTAALISTLDLV
ICVDTSVAHLAGALGKPVWVLSRFDGCWRWLTGRRTTPWYPTMRLFNQTGPGDWAPVVES
VAGALRGFVDEQLGAGA