Protein Info for MPMX19_06637 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 614 PF13432: TPR_16" amino acids 6 to 55 (50 residues), 30.9 bits, see alignment 9.9e-11 amino acids 45 to 103 (59 residues), 16.9 bits, see alignment 2.2e-06 amino acids 143 to 202 (60 residues), 24.2 bits, see alignment 1.2e-08 PF14559: TPR_19" amino acids 11 to 66 (56 residues), 33 bits, see alignment 1.9e-11 amino acids 152 to 197 (46 residues), 31.6 bits, see alignment 5.1e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (614 amino acids)

>MPMX19_06637 hypothetical protein (Azospirillum sp. SherDot2)
MGHVTDRAIELYKAGRRDEALSLVEQVLREDPVDRDALSLAGVILYQSDRLDEAERMLHR
LIAGHPLFAQGRINLATAMLARGAKREALGHLRVACLLTPGDPDAHGRLGNLLHGAGDYV
AATRHMTHAARLCPTDPDRQVLLAVALLSHCDHAGAVEVLTPVLARHPGHTDARTHLAAA
WLSLGRPDLAEETLLAAGGAPSGDTPPSGGKPPTAQGDPILSRARLYRQIAADAQRPHTP
EGLLVRAPFSVLSGYGDFAQHFVRSLMECGTTLRLAGLMGEESWRPAFTDPILQAAARRL
GDPVRARLALSVLTPPLVEPVPGLPTVNYTMFEGPRIPDSWAVCNRAHEMVVVPTDSSRL
AWIAAGHPEDRIRVCPPGIAPHPADAAAQPLPIVGPGGRSVMDYRVRVLNISDFVARKNL
AGLLRVWLRGTRADDDAILILKVGKGGSSLMGEMRRLVEEGMRATGRRLDEAAPVALLTD
RYDDAGIAGLYAVATHYLSLSHGEGWDLPITRAGCLGAGLIAPRHSAYTAYLNDRVAHLI
PCTTGPALMPYSSAYYQPFHGLDWWHPDEDAAADILSRVIRDPEGGRRDAARHLMDNFTW
DAAARRLLDALDGV