Protein Info for MPMX19_06632 in Azospirillum sp. SherDot2

Annotation: Toxin RTX-I translocation ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 792 transmembrane" amino acids 240 to 262 (23 residues), see Phobius details amino acids 274 to 294 (21 residues), see Phobius details amino acids 352 to 372 (21 residues), see Phobius details amino acids 378 to 398 (21 residues), see Phobius details amino acids 473 to 500 (28 residues), see Phobius details PF03412: Peptidase_C39" amino acids 86 to 210 (125 residues), 27.8 bits, see alignment E=3.1e-10 PF00664: ABC_membrane" amino acids 241 to 506 (266 residues), 130 bits, see alignment E=2.1e-41 PF00005: ABC_tran" amino acids 569 to 718 (150 residues), 117.7 bits, see alignment E=9.8e-38

Best Hits

KEGG orthology group: None (inferred from 73% identity to azl:AZL_f01590)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (792 amino acids)

>MPMX19_06632 Toxin RTX-I translocation ATP-binding protein (Azospirillum sp. SherDot2)
MDGGWALGQMACRCWANSAISTESRGYASFASGGLYALRRALGPKERMVDRNRVTERYED
LAFATHSTFFTAVPMTLAAEVPCAHTGLHSLAVVARQRGLDVSAERLQHSNVIGNEELDT
ARLLRVAKSIGLKAEATTLDWDDLGKLQDAFPAILRLRNGNSMVVVGFGKQGDTDVAILQ
DPLAGQELILPVDRIRLSQAWAGEVVLLKRDYGLTDAEQPFGLKWFLVEILRHKRIFRDI
GIAAILMSLFALAVPIFFQLVVDRVLVHRSMGTLGVLMIGMIGVILFEAAFSYLRQYLML
YATKKIDAKMNVQVFNKLVGLPMHYFERVSSGEIVKNAQQAERIRNFLTGQLFMTLLDTV
SLVVFLPIMFMYSVPLTFLVLAFSILMAINIGIMIPLIKGRMKDLYQAEVRQQSFLIENI
HGMRTVKSLALDGRQKLEWDHRVARAAEQRFDVGRIMIIGQTIAQPLNQLMMACLLGLGT
YLALNGDMMMGALIAFYILAGRVTQPLLQMAQLVQQFQEVSISVQMLGTIMNHAPEEGRT
GRGLRTPLRGTVEFQEVRFRYAPSSPPALDGVSFTASEGTILGVMGRSGSGKTTVTRLLQ
GLHRAQEGLIRIDGRDLREYDLDHLRASIGVVLQDNFLFTGTIRENVSAAKPGATTDEIL
RVIHLAGADEFVERLPKGLDTMLEEGSSNLSGGQRQRLAIARALLTNPKILIMDEATSAL
DAESEAIVQANLMNIARGRTMIIISHRLSSLVPSDTILVMDRGKVVDSGKHDELLVRCDI
YQHLWHQQNRHI