Protein Info for MPMX19_06442 in Azospirillum sp. SherDot2

Annotation: Adaptive-response sensory-kinase SasA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details amino acids 154 to 181 (28 residues), see Phobius details PF00672: HAMP" amino acids 180 to 227 (48 residues), 30.9 bits, see alignment 5.5e-11 PF00512: HisKA" amino acids 234 to 298 (65 residues), 31 bits, see alignment E=4.2e-11 PF02518: HATPase_c" amino acids 343 to 450 (108 residues), 85.4 bits, see alignment E=7.5e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (471 amino acids)

>MPMX19_06442 Adaptive-response sensory-kinase SasA (Azospirillum sp. SherDot2)
MTTLPRLFRTASFRLAAAFALIFAVSALILGGVVYWTTHAALEQQMNSRIMADLDRLRGE
FQTGGQAQLAAEVRRTAGRPGALHELVADAGGTILAGDMTTVPQPGWSTIEPHRMPSDES
ELVGIRTLTVRLPDGTLLAVGDDLEWIEDADEAIFHAFSVAVLVTLGLGIAGGALLSVAF
LQRVDAISRTAEAIIAGDLASRIPVRGTGDDLDRLSNTLNHMLGRIADLMEGLRQVSNDI
AHDLRTPLARLRQRLERVRTTAASTDDYAVAVDAALAETDTLLETFAALLRIAQIEGGAR
PPVRDPVELHVIVETVVEAFTPSAEEDGKVLVSPRFDPAVVAGDRELLTQMLVNLVENAI
RHTPAGTRIEVALAAGPGVARLTIADDGPGVPAEERGCIFRRFYRLERSRTTDGSGLGLS
LVKAIADRHEATVSVTDNGPGLRVSLDFNLRDGASARPAGECPPVTTQHSR