Protein Info for MPMX19_06283 in Azospirillum sp. SherDot2

Annotation: ISL3 family transposase ISAzba9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 552 PF14690: Zn_ribbon_ISL3" amino acids 42 to 85 (44 residues), 38.4 bits, see alignment 1.9e-13 PF01610: DDE_Tnp_ISL3" amino acids 161 to 263 (103 residues), 66.5 bits, see alignment E=4.8e-22 amino acids 427 to 548 (122 residues), 31.7 bits, see alignment E=2.1e-11 PF13384: HTH_23" amino acids 309 to 341 (33 residues), 27.1 bits, see alignment (E = 4.1e-10)

Best Hits

KEGG orthology group: None (inferred from 72% identity to azl:AZL_a10720)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (552 amino acids)

>MPMX19_06283 ISL3 family transposase ISAzba9 (Azospirillum sp. SherDot2)
MVVPLNISLSSIGFLPNLQVLDQIDHSFYRITVRAQPAAASVSCIGCGTPSRRVHGAYWR
SLGDVACFGRPTVLLIRVRRFRCSNATCPRRTFAEPLPGVARPRARQTDRLRAVHRTIGL
ALGGNPGSRHARAMGVPISRTTLGHRVRVGIDMAVAPVTVLGVDDWAWRKGHRYGTILCD
LERRRVIDLLPDRSADTLATWLAAHPNVTVVVRDRAGAYAEGTARGAPNALQITDRWHLL
RNASDALRSVLEHHHRDLRAAARMASAPSEPPGEMSEAPQPVAAEPERRLRSTERRAQAA
QERRDARYAEAVRLRDQGLSTRAVARSLGVERKTVRRWLRAGHAPTWQHADRGTSILNPY
HGYLEDRWQAGCRNAAALWRELQERGFPGQYSVVRDWGTRRRRQDPPAEPRGTSDKPVSA
KQSEPPTPRRAVRLLAGDPDRLTDEDRRFVQALRERSPAIATAADLITRFCEMVKGKVPD
PFDGWLREAEVSALSPFAAGIRRDEDAVRAALSEPWSSGQVEGQVNRLKAIKRAMYGRAG
FDLLRARVLSHA