Protein Info for MPMX19_06199 in Azospirillum sp. SherDot2

Annotation: GTPase HflX

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 448 TIGR03156: GTP-binding protein HflX" amino acids 36 to 383 (348 residues), 431.2 bits, see alignment E=1.3e-133 PF13167: GTP-bdg_N" amino acids 39 to 131 (93 residues), 88.7 bits, see alignment E=6.3e-29 PF16360: GTP-bdg_M" amino acids 134 to 213 (80 residues), 102.5 bits, see alignment E=3e-33 PF01926: MMR_HSR1" amino acids 221 to 325 (105 residues), 67.8 bits, see alignment E=1.8e-22

Best Hits

KEGG orthology group: K03665, GTP-binding protein HflX (inferred from 71% identity to azl:AZL_015000)

Predicted SEED Role

"GTP-binding protein HflX" in subsystem Hfl operon or Universal GTPases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (448 amino acids)

>MPMX19_06199 GTPase HflX (Azospirillum sp. SherDot2)
MGTNPNTDSKTIETRQSNLGRALVLHPVLRGVETVRSPEASLEEAVGLAAAIGLKVAQAA
VVKVSQPRPATLLGGGAIEQQAKLIEDAHEAGEDIDLVIVDHALTPVQQRNLEKAFGAKV
IDRTGLILEIFGARARTHEGQLQVELASLTYQKSRLVRSWTHLERQRGGFGFLGGPGESQ
LELDRRLIGNRIVRIRRELDDVRRTRGLHRKARAKVPYPVVALVGYTNAGKSTLFNRMAG
ADVFAKDLLFATLDPTMRQVVLPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVQSADI
ILHVRDIAHPDTEAQKADVEAILADLGIDPERDPRVVEVSNKIDLLAGAEHDAVLARAGR
DGNACALSAATGERLDTLFRILDGRMTAGRELVELDVEHGDGATLAWLYAHGEVVGRRDD
DSHAHLHVAIEPAMLARLGHPGQEHAAA