Protein Info for MPMX19_06174 in Azospirillum sp. SherDot2

Annotation: Inner membrane metabolite transport protein YhjE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 transmembrane" amino acids 43 to 62 (20 residues), see Phobius details amino acids 68 to 92 (25 residues), see Phobius details amino acids 102 to 122 (21 residues), see Phobius details amino acids 128 to 153 (26 residues), see Phobius details amino acids 167 to 190 (24 residues), see Phobius details amino acids 202 to 222 (21 residues), see Phobius details amino acids 257 to 282 (26 residues), see Phobius details amino acids 288 to 313 (26 residues), see Phobius details amino acids 320 to 339 (20 residues), see Phobius details amino acids 346 to 367 (22 residues), see Phobius details amino acids 385 to 404 (20 residues), see Phobius details amino acids 410 to 429 (20 residues), see Phobius details PF00083: Sugar_tr" amino acids 34 to 230 (197 residues), 54.9 bits, see alignment E=7.6e-19 PF07690: MFS_1" amino acids 69 to 384 (316 residues), 64.6 bits, see alignment E=8e-22

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_e01340)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (436 amino acids)

>MPMX19_06174 Inner membrane metabolite transport protein YhjE (Azospirillum sp. SherDot2)
MMTSSIAAVERDGRLVNARHHGINPGEIAIGVIIGRTSEFFDFFVYAIASVIVFPKLVFP
YVDPLTGTLWSFAIFALAFVARPIGTFIFMAIDENYGRSAKLTIALFLLGISTVALAFLP
GYESIGVAAAWLLALSRIGQGVALGGTWDGLASLLAMNAPENRRGWYAMIPQLGAPIGLI
VASGLFAYMVNSLSAEDFFAWGWRYPFFVAFAINVVALFSRLRLVQTPEFERLFVNRELQ
PAPVVETLQVEGKRVVIGAFAPLASFALFHMVTVFPLSWIFLNANQETGVFLVIEVIAAA
FGVVAIVASGYIADRVGRRTLLGTCAAAIAVFSGFAPMLLDGGKMGELVFMVLGFVILGL
SFGQSSGSVASGFSQQYRYTGSAMTSDLAWLFGAGFAPFVALFLSSHFGLMASGLYLLSG
AVCTLLALKINKTLSS