Protein Info for MPMX19_06148 in Azospirillum sp. SherDot2

Annotation: Beta-glucosidase A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 signal peptide" amino acids 1 to 42 (42 residues), see Phobius details PF00232: Glyco_hydro_1" amino acids 54 to 491 (438 residues), 486.5 bits, see alignment E=3.1e-150 TIGR03356: beta-galactosidase" amino acids 55 to 483 (429 residues), 569.2 bits, see alignment E=2.9e-175

Best Hits

KEGG orthology group: K05350, beta-glucosidase [EC: 3.2.1.21] (inferred from 90% identity to azl:AZL_e01630)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (495 amino acids)

>MPMX19_06148 Beta-glucosidase A (Azospirillum sp. SherDot2)
MTLEKQAMQRRTFLKTALKATAATAAGTGALAVLGREAVQAAPGGAPAAVPSVSFPMDFL
WGVSTSSYQIEGAVAEDGRGPSVWDTYSHSFGRIANGDTGDVACDHYHRYAEDVDLMARA
GMKAYRFSIAWPRVMPQGTGAVNVKGLDFYDRLTDTLLAKGIQPWPCLFHWDLPQALQDK
GGWTNRDIAGWFTDYALAVTARLGDRARNWAMLNEPSVVAIFGHGTGGHAPGLTGRQNCL
KAIHHQNLAQGTALAALRQAGGKNWRLGTVLSLQPSWPVGGLDSNYPASLMWDALWNRSC
LDPLFKGRFPEQLEAEFSRIAKPDDLARIKQPVDFLGVNYYSRMHQQPDGQGLFGTGYGS
APEGTRKTGMEWPVEPDGLSEILAELQEKYGNPPVYVTENGADYPDSVGPSGRVEDRDRI
AYLRDHLLAAAKSIDEGCNLKGYMAWTLLDNFEWSEGYRRHFGLVQVDRKTMARTPKASY
DWYASVIRNNAVPLV