Protein Info for MPMX19_06120 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 318 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 59 to 80 (22 residues), see Phobius details amino acids 92 to 115 (24 residues), see Phobius details amino acids 122 to 142 (21 residues), see Phobius details amino acids 151 to 170 (20 residues), see Phobius details amino acids 176 to 196 (21 residues), see Phobius details amino acids 208 to 228 (21 residues), see Phobius details amino acids 239 to 258 (20 residues), see Phobius details amino acids 270 to 290 (21 residues), see Phobius details amino acids 296 to 315 (20 residues), see Phobius details PF00892: EamA" amino acids 28 to 165 (138 residues), 62.7 bits, see alignment E=2.1e-21 amino acids 178 to 313 (136 residues), 62.1 bits, see alignment E=3.3e-21

Best Hits

KEGG orthology group: None (inferred from 88% identity to azl:AZL_e01910)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (318 amino acids)

>MPMX19_06120 hypothetical protein (Azospirillum sp. SherDot2)
MSQSSLSSEATAPDLSGARLLPVQMLAGLGLAVAGVVAFSLRPVIIKLAYRYNVDPVTLI
MLRMVFALPFFLGMALWAGASKGERAPIAGRDIALTVALGVTGYYAASFCDFLGLRYVSA
GMGRLLLFLYPTIVVLLSALFLGKRIGLREVVALVVSYAGVALVVWSEIGTGHPDFATGA
ALVFMGAFLYSIYLVGSSRVVQRIGSMHFTAYAMTAACLCCILQFLVLRPLSALDLPLPV
YGLSAVMAVVCTVLPVLMTAEALRRVGPNLVALSGAIGPVSAAVFGYLVLAEPMGWLQLA
GAALTVAGVMIISLWKTA