Protein Info for MPMX19_06065 in Azospirillum sp. SherDot2

Annotation: Anaerobic nitric oxide reductase transcription regulator NorR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 494 PF13188: PAS_8" amino acids 29 to 77 (49 residues), 21.6 bits, see alignment 6.9e-08 PF00989: PAS" amino acids 29 to 121 (93 residues), 29.4 bits, see alignment E=3.2e-10 PF08448: PAS_4" amino acids 31 to 122 (92 residues), 30.9 bits, see alignment E=1.2e-10 PF14532: Sigma54_activ_2" amino acids 165 to 336 (172 residues), 64.1 bits, see alignment E=7.5e-21 PF00158: Sigma54_activat" amino acids 165 to 331 (167 residues), 217.6 bits, see alignment E=3.9e-68 PF07728: AAA_5" amino acids 187 to 306 (120 residues), 24.4 bits, see alignment E=1.1e-08 PF02954: HTH_8" amino acids 450 to 487 (38 residues), 35.7 bits, see alignment 2.7e-12

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_e03910)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (494 amino acids)

>MPMX19_06065 Anaerobic nitric oxide reductase transcription regulator NorR (Azospirillum sp. SherDot2)
MSERERFSEVRQGDAALLRSRAIPSLFEALETQSEGTVAVDRHARVVWINEKYARMLGIS
DPAEAIGREVEEIIPHSQMRQILATGQPILLDLMLFGTQRLVVSRFPLTDDAGAVIGAVG
FVLYDSLHRLKPLLAELSRLEAELAATKRRLDEGRQPRYTLQSYVGDSPVCLEVKRKARL
AARTDAPILLLGETGTGKELIAQAIHGLSARSGRSFVGVNVAAIPETLLEAEFFGAVPGA
YTGLDRRGREGRFKTADGGTLFLDEIGDMPLGLQAKLLRALQEQEIEPLGSDRPVKVDVR
VIAATNVDLEQRIRDGRFRSDLYYRLNVLPIRLPALAEMGGGLEAIAESILQEIAARTGL
PLRGLTPEAVEALGRHRWPGNVRELRNVLERACLLTDNRRLTAADLAEALPDLGEAGTDG
ALAVSVPAAIRTEQRPQSLPLPGYDQAYDEFERGLLGRALAASGGRATEAAQALGISRAA
FYKKLARLGMRAGG