Protein Info for MPMX19_06048 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 878 transmembrane" amino acids 30 to 52 (23 residues), see Phobius details amino acids 507 to 527 (21 residues), see Phobius details PF00672: HAMP" amino acids 527 to 569 (43 residues), 45 bits, see alignment 1.1e-15 PF00015: MCPsignal" amino acids 680 to 842 (163 residues), 111.2 bits, see alignment E=5e-36

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_e02290)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (878 amino acids)

>MPMX19_06048 hypothetical protein (Azospirillum sp. SherDot2)
MTMNARDDTSMPHHPTGAAGGRRLGVRGKLLLAFAGMAGMTVAASMVGLTSFSAVERPLT
QIVGTGLPEMELAKRLSGESSGIAAAAPVLAAAESQSERERVYGEIMGNGKALGALVEEL
ASHRSGDPRIGDLRTKTQGLIATLERGNAAANLRLSVRGTRETMAVDLAKSYDAFLANLA
PLTERAGATLRSKGETLDSSTERDMNSLGDAIRSLITMYEVRGDLGLASEALTRTGGAET
AFAVTQFQQNYLEAAARMVSATAQIGSRLSKETSDGLDAFFLLGDGADGVFDMRRKALEL
PAGSAERDAIRQKTTEVLADAARRQATLLDQMESPLMRLKAEIKLSSVNIRSQTRDSMQD
LLGDGLARFRTYLELSTYAAATVGALNEATQAPSADRLAMLETRFTTAAKAMEERLKALQ
AAGDDGLPKLVKSAELLAGFGKGDNSLFKLRRSELDAAAENEKVLAENRQIAKQFAGMVD
GQIAAMKQEADTAAAGATDALSASRKMLILFAVGSLIGAAALAWFVVGRNIVARLSQLSD
AMRAIAAGNLNAPIPAAGSDEIGDMTRALMVFRDTANEANAANARAEAERGRAAGERRRA
MVEMAENFESSVRGVLDRVARAAGEMQDMAQRMSRNAEATTGEAATAASTSQQAEGSVKA
VAAATEELSASIQEIGSQVHASSQIARKAATEAERTDRTVEGLSQSANKIGEVVQLINDI
ASQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTGKATEEISSQIQAMQAVTQDA
VDAIRSIAGTIREINEIAATVAAAVEQQSAATREIARNVGEAADGTQHVRRNIDSVARAA
AESGESATRVLTASSTVADEVRSLGSQVDSLVNRMRAG