Protein Info for MPMX19_06041 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 631 PF08448: PAS_4" amino acids 18 to 111 (94 residues), 26 bits, see alignment E=3.8e-09 amino acids 159 to 270 (112 residues), 32.3 bits, see alignment E=4.1e-11 amino acids 293 to 404 (112 residues), 30.5 bits, see alignment E=1.5e-10 TIGR00229: PAS domain S-box protein" amino acids 149 to 275 (127 residues), 70.3 bits, see alignment E=8.3e-24 PF00989: PAS" amino acids 153 to 265 (113 residues), 44.6 bits, see alignment E=5.3e-15 PF13426: PAS_9" amino acids 162 to 267 (106 residues), 49.6 bits, see alignment E=1.7e-16 PF07568: HisKA_2" amino acids 425 to 498 (74 residues), 84.2 bits, see alignment E=2.2e-27 PF07536: HWE_HK" amino acids 425 to 479 (55 residues), 30.6 bits, see alignment 1.9e-10 PF13581: HATPase_c_2" amino acids 516 to 610 (95 residues), 33.3 bits, see alignment E=1.8e-11 PF02518: HATPase_c" amino acids 524 to 615 (92 residues), 41.9 bits, see alignment E=4.9e-14

Best Hits

KEGG orthology group: None (inferred from 89% identity to azl:AZL_e02320)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (631 amino acids)

>MPMX19_06041 hypothetical protein (Azospirillum sp. SherDot2)
MAPRLPEQPTWALDVLGALDAGILLLDRHCRVLYWNGWMEQASTLTAREILGHDLFDALP
NLRESRLHIAVRDTLATGAPGVLSHTLNPMLFPLRLPDGRRMVHNVVIRPLPSHAPSPHS
QSAGNEARCLIQVTDVTASVNRERVLREQRDARYRAIVDTAPDAIITTDTRGMVQWMNGT
ATRQFDYRPDELIGQSVAVLLGEDAPDWIAMAEGSGPGAAGMDTAAQPVELSGRRRDGSH
IDLELSMARWESEGRSFITGILRDITERRRTREELRTSALAMRQLAEQTKATLDALPAFI
AVLDRSGHIVSVNRAWAEAGPETTFLGQGCIVGDDYLDHCGRGETADPRADTVMDSLRRL
LSEGGPPVSAEYVTNNQHWFRCLAAPMPAGPFGGTVLMHIDVTEIKSMEAALRKLVGQKS
TLLREVNHRVKNSLQLVSSLLTLQTLSLPDEGVRVHFQDARSRIEAIARVHNRLYQADQF
QTIEFGTYLNELCEDLARASGGDSMCDIVVRSDVIDLPIDHAAPLGLIANELITNAVKHR
GKSAARVTVTFRREDEKLALTVSDRGPGLPSNFDIRKSRSLGMRLISSLAGQIRASVDID
TTTQGTTFRIELPVPDEVPLLETSSPEEISG