Protein Info for MPMX19_05998 in Azospirillum sp. SherDot2

Annotation: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 568 transmembrane" amino acids 18 to 39 (22 residues), see Phobius details amino acids 106 to 126 (21 residues), see Phobius details amino acids 132 to 151 (20 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 197 to 225 (29 residues), see Phobius details amino acids 237 to 257 (21 residues), see Phobius details amino acids 290 to 313 (24 residues), see Phobius details amino acids 320 to 338 (19 residues), see Phobius details amino acids 345 to 363 (19 residues), see Phobius details amino acids 375 to 402 (28 residues), see Phobius details amino acids 408 to 428 (21 residues), see Phobius details amino acids 436 to 456 (21 residues), see Phobius details PF13231: PMT_2" amino acids 76 to 253 (178 residues), 39 bits, see alignment E=5e-14

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_e02810)

Predicted SEED Role

"4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family" in subsystem Pterin biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (568 amino acids)

>MPMX19_05998 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase (Azospirillum sp. SherDot2)
MTAASSPQGHLPASRLPIWAYALLALIAAALFLPGFTVLPPFDRDEARFAQASSQMLDSG
NYVDIRFQDETRYKKPVGIYWLQTAATAAADAVRGIPVGADKVIWTYRIPSFLGAILAVL
ASAWTAARLFGGPAGFIAGLMMASCVVLGVEARMAKTDAVLLSTVVIGQAVLAHLYLGRR
GPVPAGRAAWVAPLVFWIAAGIGVLVKGPMVLLVSGSTVLVLALWDREAGWLKRLKPLAG
LGIVVAIAAPWLIAIAIKSKGAFFAESVGHDMLGKVSGGQEGKGLPPGYYLGTFWVTFAP
WSLLALLAVPWVWARRRLDAVRFCIAWIIPSWLVFEAVPTKLLHYTLPVFPAIAAIAAAA
LIDGFDRSREKPRRWLVAAAVALGTIGFGALTLAVAVIPWLVDGRIDPVGVALVPAVGGL
FALALRSLLRGERRSGLAAGVGAAALLYAGTYAAVLPNIDGVWVSRQAARAVAQVRPCPD
SVVATAGYSEPSLVFLLGTPTRLVHGAGAAAHLTADRACGLALVEDREAPAFLDSLGTAT
PLPLADLSGFNYNTGKRLHLTLYRLPAS