Protein Info for MPMX19_05986 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 505 transmembrane" amino acids 52 to 71 (20 residues), see Phobius details amino acids 104 to 125 (22 residues), see Phobius details amino acids 178 to 195 (18 residues), see Phobius details amino acids 212 to 231 (20 residues), see Phobius details amino acids 362 to 381 (20 residues), see Phobius details TIGR02745: cytochrome c oxidase accessory protein CcoG" amino acids 49 to 502 (454 residues), 497.8 bits, see alignment E=1.5e-153 PF12801: Fer4_5" amino acids 110 to 148 (39 residues), 32.4 bits, see alignment 3.4e-11 PF13746: Fer4_18" amino acids 233 to 340 (108 residues), 129.6 bits, see alignment E=2.8e-41 PF13534: Fer4_17" amino acids 235 to 303 (69 residues), 26 bits, see alignment E=4.7e-09 PF11614: FixG_C" amino acids 376 to 503 (128 residues), 109 bits, see alignment E=7.5e-35

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_e02910)

Predicted SEED Role

"Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation" in subsystem Biogenesis of cbb3-type cytochrome c oxidases or Terminal cytochrome C oxidases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (505 amino acids)

>MPMX19_05986 hypothetical protein (Azospirillum sp. SherDot2)
MLRANVEPEIRRIDMPDGSIVQQGPAQPAKVPLYENHKTIHPKAVKGLYRRLKTVTFSVL
LALFFIAPWIRWERGPDAPAQAVLFDLTTPRFFLFWIEIWPQEIYYLTGLLIVAALGLFL
ATALAGRVWCGFACPHTVWTDLFVWIERVFEGDRAERIRMDKQPWTARKILRKAGKHAGW
IALSLVTGFGFLAYFTDAPALLHDLATFQASYEATSFFGIFVGMTYVMAGWTREQMCMYM
CPWPRIQSAMLDEHSLVVTYQVDRGDNRGPKRKSQSWDERRAQGFGDCIDCGQCVQVCPM
GIDVRTGEQSDCINCGLCVDACDSIMIQQGLPTRLIAFDSLAAQDTRASGKSYQWHLFRP
RVIVYALMMLVIGGAMAWSFALRPSLNITVLRDRAPLFVTLSDGSIRNAYTFKVANKTRQ
SRSYTLSVAGLPTADIKVIGEAEDEAAAHTAIISAEPDSVATYRVYVTAPRTALTAASLP
LTFQLSDTGTAEKNSRDSVFLGPAN