Protein Info for MPMX19_05941 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 362 transmembrane" amino acids 37 to 57 (21 residues), see Phobius details amino acids 70 to 92 (23 residues), see Phobius details amino acids 101 to 126 (26 residues), see Phobius details PF07885: Ion_trans_2" amino acids 48 to 125 (78 residues), 47.5 bits, see alignment E=1.4e-16 PF02254: TrkA_N" amino acids 146 to 264 (119 residues), 89.9 bits, see alignment E=1.5e-29

Best Hits

KEGG orthology group: None (inferred from 45% identity to bur:Bcep18194_B1162)

Predicted SEED Role

"Potassium channel protein" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (362 amino acids)

>MPMX19_05941 hypothetical protein (Azospirillum sp. SherDot2)
MREAVERRLQDRRRTKPSLRKGRLLHVRSGLSAEKTLLLRVGIVAALIALVIAVFWFDRD
GLKDQIDGHISFPDILYFAMITVTTVGYGDIVPVSHTARLIDAFAVTPIRIFIWFIFLGT
AYELVVQRIVEEFRLSRIQKQLQGHIVLCGFGHSGFIAAQETVSKGHPADHIVVIDESED
RIQLAADCGFVGLLGDGTSEDTLKNACVGKAKAVIVSTGRDDTTILVILTVRHLSAATKV
VANIKQEENIKLANLSGADLVVSPPKIGGYLMADAVETRYATPFLCDLMSAGGQMVLSER
RAEADEVGLTMAEVTTGMVVQVHSHGRDIPFTERNRYIIQPQDTLLIISRPTDARIPSPP
GG