Protein Info for MPMX19_05924 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 transmembrane" amino acids 24 to 46 (23 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 158 to 180 (23 residues), see Phobius details amino acids 199 to 217 (19 residues), see Phobius details amino acids 225 to 249 (25 residues), see Phobius details amino acids 274 to 274 (1 residues), see Phobius details amino acids 277 to 304 (28 residues), see Phobius details amino acids 324 to 343 (20 residues), see Phobius details PF00528: BPD_transp_1" amino acids 170 to 353 (184 residues), 77.2 bits, see alignment E=6.8e-26

Best Hits

KEGG orthology group: K02050, sulfonate/nitrate/taurine transport system permease protein (inferred from 95% identity to azl:AZL_e03520)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (359 amino acids)

>MPMX19_05924 hypothetical protein (Azospirillum sp. SherDot2)
MTSLTDTSADLARAQRKARRAHTLNRIASALTAVGLGWLAPLLRLAAGENPRQQGVELWR
QMGIPLTAILLFLAAWGWAAPQVQTSLGAIPGPAQVWEQATNLYADHKAERAKEAAFYDR
QAKRNAEILAKDPKAEVKTRPYAGKPTYIDQIFTSLKTVFTGFLLGALVAVPLGVASGLS
PTVNAAINPLIQIFKPVSPLAWLPLVTMVVSATVSGSDPLFEKSFLTSAITVTLCSLWPT
LINTAVGVSSIDRDLMNVGKVLQLSGFTMVRRLVLPSALPFIFTGLRLSLGVGWMVLIAA
EMLAQNPGLGKFVWDEFQNGSASSLARIMVAVFTIGLIGFLLDRVMLALQSAVSHSPAR